Protein–RNA interactions for Protein: P04230

H2-Eb1, H-2 class II histocompatibility antigen, E-B beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2-Eb1P04230 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2-Eb1P04230 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2-Eb1P04230 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2-Eb1P04230 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2-Eb1P04230 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2-Eb1P04230 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2-Eb1P04230 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2-Eb1P04230 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
H2-Eb1P04230 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.19□□□□□ -0.46
H2-Eb1P04230 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2-Eb1P04230 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.19□□□□□ -0.46
H2-Eb1P04230 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2-Eb1P04230 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
H2-Eb1P04230 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
H2-Eb1P04230 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
H2-Eb1P04230 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2-Eb1P04230 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2-Eb1P04230 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.19□□□□□ -0.46
H2-Eb1P04230 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.19□□□□□ -0.46
H2-Eb1P04230 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.19□□□□□ -0.46
H2-Eb1P04230 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2-Eb1P04230 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.19□□□□□ -0.46
H2-Eb1P04230 Gm43818-201ENSMUST00000200605 466 ntBASIC12.19□□□□□ -0.46
H2-Eb1P04230 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2-Eb1P04230 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2-Eb1P04230 Gm10076-201ENSMUST00000073238 384 ntBASIC12.19□□□□□ -0.46
H2-Eb1P04230 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2-Eb1P04230 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2-Eb1P04230 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2-Eb1P04230 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.19□□□□□ -0.46
H2-Eb1P04230 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2-Eb1P04230 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2-Eb1P04230 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2-Eb1P04230 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
H2-Eb1P04230 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.19□□□□□ -0.46
H2-Eb1P04230 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
H2-Eb1P04230 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2-Eb1P04230 Paupar-201ENSMUST00000194826 3482 ntBASIC12.19□□□□□ -0.46
H2-Eb1P04230 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.18□□□□□ -0.46
H2-Eb1P04230 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.18□□□□□ -0.46
H2-Eb1P04230 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Gm24830-201ENSMUST00000102024 166 ntBASIC12.18□□□□□ -0.46
H2-Eb1P04230 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Gm13342-201ENSMUST00000121055 207 ntBASIC12.18□□□□□ -0.46
H2-Eb1P04230 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.18□□□□□ -0.46
H2-Eb1P04230 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.18□□□□□ -0.46
H2-Eb1P04230 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Gm8738-201ENSMUST00000172606 329 ntBASIC12.18□□□□□ -0.46
H2-Eb1P04230 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.18□□□□□ -0.46
H2-Eb1P04230 Gm5781-201ENSMUST00000219792 443 ntBASIC12.18□□□□□ -0.46
H2-Eb1P04230 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
H2-Eb1P04230 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.18□□□□□ -0.46
H2-Eb1P04230 Gm26232-201ENSMUST00000083360 166 ntBASIC12.18□□□□□ -0.46
H2-Eb1P04230 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.18□□□□□ -0.46
H2-Eb1P04230 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
H2-Eb1P04230 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2-Eb1P04230 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2-Eb1P04230 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2-Eb1P04230 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.17□□□□□ -0.46
H2-Eb1P04230 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2-Eb1P04230 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2-Eb1P04230 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.17□□□□□ -0.46
H2-Eb1P04230 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2-Eb1P04230 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H2-Eb1P04230 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms