Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
BckdkO55028 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
BckdkO55028 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
BckdkO55028 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BckdkO55028 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
BckdkO55028 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BckdkO55028 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BckdkO55028 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BckdkO55028 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
BckdkO55028 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BckdkO55028 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BckdkO55028 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BckdkO55028 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BckdkO55028 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
BckdkO55028 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
BckdkO55028 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BckdkO55028 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
BckdkO55028 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
BckdkO55028 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BckdkO55028 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.44□□□□□ -0.58
BckdkO55028 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
BckdkO55028 Gm14726-201ENSMUST00000120623 896 ntBASIC11.44□□□□□ -0.58
BckdkO55028 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
BckdkO55028 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
BckdkO55028 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.44□□□□□ -0.58
BckdkO55028 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.44□□□□□ -0.58
BckdkO55028 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BckdkO55028 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
BckdkO55028 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.44□□□□□ -0.58
BckdkO55028 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BckdkO55028 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
BckdkO55028 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
BckdkO55028 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
BckdkO55028 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.44□□□□□ -0.58
BckdkO55028 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
BckdkO55028 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
BckdkO55028 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BckdkO55028 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BckdkO55028 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
BckdkO55028 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BckdkO55028 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
BckdkO55028 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.43□□□□□ -0.58
BckdkO55028 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.43□□□□□ -0.58
BckdkO55028 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.43□□□□□ -0.58
BckdkO55028 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.43□□□□□ -0.58
BckdkO55028 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
BckdkO55028 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 Gm15808-201ENSMUST00000119046 604 ntBASIC11.43□□□□□ -0.58
BckdkO55028 Gm13316-201ENSMUST00000140537 691 ntBASIC11.43□□□□□ -0.58
BckdkO55028 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
BckdkO55028 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.43□□□□□ -0.58
BckdkO55028 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.43□□□□□ -0.58
BckdkO55028 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.43□□□□□ -0.58
BckdkO55028 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.43□□□□□ -0.58
BckdkO55028 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 Gm18056-201ENSMUST00000207670 568 ntBASIC11.43□□□□□ -0.58
BckdkO55028 Gm18061-201ENSMUST00000208350 562 ntBASIC11.43□□□□□ -0.58
BckdkO55028 Gm18063-201ENSMUST00000208529 568 ntBASIC11.43□□□□□ -0.58
BckdkO55028 Gm18052-201ENSMUST00000208750 559 ntBASIC11.43□□□□□ -0.58
BckdkO55028 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.43□□□□□ -0.58
BckdkO55028 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.43□□□□□ -0.58
BckdkO55028 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.43□□□□□ -0.58
BckdkO55028 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.43□□□□□ -0.58
BckdkO55028 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
BckdkO55028 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
BckdkO55028 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
BckdkO55028 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.43□□□□□ -0.58
BckdkO55028 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.43□□□□□ -0.58
BckdkO55028 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
BckdkO55028 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.43□□□□□ -0.58
BckdkO55028 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
BckdkO55028 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
BckdkO55028 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BckdkO55028 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
BckdkO55028 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms