Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm26185-201ENSMUST00000157692 266 ntBASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Gm38671-201ENSMUST00000200573 130 ntBASIC11.21□□□□□ -0.61
Shisa8J3QNX5 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Gm8463-201ENSMUST00000208573 613 ntBASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Shisa8J3QNX5 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.21□□□□□ -0.62
Shisa8J3QNX5 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Shisa8J3QNX5 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Shisa8J3QNX5 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Shisa8J3QNX5 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Shisa8J3QNX5 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Shisa8J3QNX5 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Shisa8J3QNX5 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Shisa8J3QNX5 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Shisa8J3QNX5 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.21□□□□□ -0.62
Shisa8J3QNX5 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Shisa8J3QNX5 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
Shisa8J3QNX5 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Shisa8J3QNX5 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.2□□□□□ -0.62
Shisa8J3QNX5 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Gm9022-201ENSMUST00000182482 992 ntBASIC11.2□□□□□ -0.62
Shisa8J3QNX5 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Gm32025-201ENSMUST00000217960 307 ntBASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.2□□□□□ -0.62
Shisa8J3QNX5 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Mir7023-201ENSMUST00000185093 64 ntBASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Gm37922-201ENSMUST00000195596 455 ntBASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.19□□□□□ -0.62
Shisa8J3QNX5 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms