Protein–RNA interactions for Protein: F8VPU2

Farp1, FERM, ARHGEF and pleckstrin domain-containing protein 1, mousemouse

Predictions only

Length 1,048 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Farp1F8VPU2 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.3□□□□□ -0.28
Farp1F8VPU2 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Ifna13-201ENSMUST00000105149 819 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.3□□□□□ -0.28
Farp1F8VPU2 Gm13487-201ENSMUST00000122240 864 ntBASIC13.3□□□□□ -0.28
Farp1F8VPU2 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Gm29436-202ENSMUST00000189054 1172 ntTSL 5 BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.3□□□□□ -0.28
Farp1F8VPU2 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.3□□□□□ -0.28
Farp1F8VPU2 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Gm6013-201ENSMUST00000212264 699 ntBASIC13.3□□□□□ -0.28
Farp1F8VPU2 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Gm26035-201ENSMUST00000083065 308 ntBASIC13.3□□□□□ -0.28
Farp1F8VPU2 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Farp1F8VPU2 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.3□□□□□ -0.28
Farp1F8VPU2 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.3□□□□□ -0.28
Farp1F8VPU2 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Farp1F8VPU2 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Farp1F8VPU2 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.29□□□□□ -0.28
Farp1F8VPU2 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Farp1F8VPU2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Farp1F8VPU2 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Farp1F8VPU2 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Farp1F8VPU2 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Farp1F8VPU2 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Farp1F8VPU2 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Farp1F8VPU2 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Farp1F8VPU2 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Farp1F8VPU2 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Farp1F8VPU2 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Farp1F8VPU2 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Farp1F8VPU2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Farp1F8VPU2 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Farp1F8VPU2 Gm7113-201ENSMUST00000120477 958 ntBASIC13.29□□□□□ -0.28
Farp1F8VPU2 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.29□□□□□ -0.28
Farp1F8VPU2 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
Farp1F8VPU2 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Farp1F8VPU2 Gm8018-201ENSMUST00000173536 789 ntBASIC13.29□□□□□ -0.28
Farp1F8VPU2 Gm9499-201ENSMUST00000180888 964 ntBASIC13.29□□□□□ -0.28
Farp1F8VPU2 Mir6420-201ENSMUST00000185032 102 ntBASIC13.29□□□□□ -0.28
Farp1F8VPU2 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.29□□□□□ -0.28
Farp1F8VPU2 Gm17838-201ENSMUST00000205872 876 ntBASIC13.29□□□□□ -0.28
Farp1F8VPU2 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.29□□□□□ -0.28
Farp1F8VPU2 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Farp1F8VPU2 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Farp1F8VPU2 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Farp1F8VPU2 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Farp1F8VPU2 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Farp1F8VPU2 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Farp1F8VPU2 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Farp1F8VPU2 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Farp1F8VPU2 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Farp1F8VPU2 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Farp1F8VPU2 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms