Protein–RNA interactions for Protein: F6RGA8

C530025M09Rik, RIKEN cDNA C530025M09 gene, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C530025M09RikF6RGA8 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
C530025M09RikF6RGA8 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
C530025M09RikF6RGA8 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
C530025M09RikF6RGA8 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
C530025M09RikF6RGA8 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
C530025M09RikF6RGA8 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
C530025M09RikF6RGA8 Gm9816-201ENSMUST00000122292 1414 ntBASIC8.11□□□□□ -1.11
C530025M09RikF6RGA8 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
C530025M09RikF6RGA8 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
C530025M09RikF6RGA8 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
C530025M09RikF6RGA8 AC126257.2-201ENSMUST00000215507 2300 ntBASIC8.11□□□□□ -1.11
C530025M09RikF6RGA8 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
C530025M09RikF6RGA8 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
C530025M09RikF6RGA8 Cog3-203ENSMUST00000227473 4197 ntBASIC8.11□□□□□ -1.11
C530025M09RikF6RGA8 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Gm15991-202ENSMUST00000212123 3565 ntBASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Gm43267-201ENSMUST00000199664 1796 ntBASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Gm13315-201ENSMUST00000120376 991 ntBASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Gm9083-201ENSMUST00000120423 819 ntBASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Gm23119-201ENSMUST00000158610 140 ntBASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 AC108416.1-202ENSMUST00000228927 1201 ntBASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Gm5356-201ENSMUST00000093326 615 ntBASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
C530025M09RikF6RGA8 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
C530025M09RikF6RGA8 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC8.09□□□□□ -1.11
C530025M09RikF6RGA8 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
C530025M09RikF6RGA8 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
C530025M09RikF6RGA8 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
C530025M09RikF6RGA8 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
C530025M09RikF6RGA8 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC8.09□□□□□ -1.11
C530025M09RikF6RGA8 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC8.09□□□□□ -1.11
C530025M09RikF6RGA8 Gm3287-205ENSMUST00000228893 1332 ntBASIC8.09□□□□□ -1.11
C530025M09RikF6RGA8 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
C530025M09RikF6RGA8 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
C530025M09RikF6RGA8 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
C530025M09RikF6RGA8 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
C530025M09RikF6RGA8 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
C530025M09RikF6RGA8 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC8.09□□□□□ -1.11
C530025M09RikF6RGA8 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC8.09□□□□□ -1.11
C530025M09RikF6RGA8 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
C530025M09RikF6RGA8 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC8.09□□□□□ -1.11
C530025M09RikF6RGA8 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC8.09□□□□□ -1.11
C530025M09RikF6RGA8 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
C530025M09RikF6RGA8 Auts2-212ENSMUST00000178555 309 ntBASIC8.09□□□□□ -1.11
C530025M09RikF6RGA8 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC8.09□□□□□ -1.11
C530025M09RikF6RGA8 Gm18304-201ENSMUST00000189162 546 ntBASIC8.09□□□□□ -1.11
C530025M09RikF6RGA8 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC8.09□□□□□ -1.11
C530025M09RikF6RGA8 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC8.09□□□□□ -1.11
C530025M09RikF6RGA8 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC8.09□□□□□ -1.11
C530025M09RikF6RGA8 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms