Protein–RNA interactions for Protein: E1U8D0

Soga1, Protein SOGA1, mousemouse

Predictions only

Length 1,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Soga1E1U8D0 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Soga1E1U8D0 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Soga1E1U8D0 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Soga1E1U8D0 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Soga1E1U8D0 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Soga1E1U8D0 Gm43447-201ENSMUST00000198471 1535 ntBASIC18.66■□□□□ 0.58
Soga1E1U8D0 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Soga1E1U8D0 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Soga1E1U8D0 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Soga1E1U8D0 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Soga1E1U8D0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Soga1E1U8D0 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Soga1E1U8D0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Soga1E1U8D0 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Soga1E1U8D0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Soga1E1U8D0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Soga1E1U8D0 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Soga1E1U8D0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Soga1E1U8D0 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
Soga1E1U8D0 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Soga1E1U8D0 AC160405.1-201ENSMUST00000218207 1545 ntBASIC18.66■□□□□ 0.58
Soga1E1U8D0 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Soga1E1U8D0 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Soga1E1U8D0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Soga1E1U8D0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Soga1E1U8D0 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Soga1E1U8D0 Gm14270-201ENSMUST00000118388 846 ntBASIC18.66■□□□□ 0.58
Soga1E1U8D0 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Soga1E1U8D0 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Soga1E1U8D0 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC18.66■□□□□ 0.58
Soga1E1U8D0 Gm18776-201ENSMUST00000188833 654 ntBASIC18.66■□□□□ 0.58
Soga1E1U8D0 Gm5700-201ENSMUST00000191483 989 ntBASIC18.66■□□□□ 0.58
Soga1E1U8D0 Ighv1-2-201ENSMUST00000195325 378 ntBASIC18.66■□□□□ 0.58
Soga1E1U8D0 Gm7940-201ENSMUST00000218195 769 ntBASIC18.66■□□□□ 0.58
Soga1E1U8D0 CT030135.2-201ENSMUST00000225255 893 ntBASIC18.66■□□□□ 0.58
Soga1E1U8D0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Soga1E1U8D0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Soga1E1U8D0 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Soga1E1U8D0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Soga1E1U8D0 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Soga1E1U8D0 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Soga1E1U8D0 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Soga1E1U8D0 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Soga1E1U8D0 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Soga1E1U8D0 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC18.65■□□□□ 0.58
Soga1E1U8D0 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Soga1E1U8D0 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Soga1E1U8D0 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Soga1E1U8D0 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Soga1E1U8D0 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Soga1E1U8D0 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Soga1E1U8D0 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Soga1E1U8D0 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Soga1E1U8D0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Soga1E1U8D0 Gm12712-201ENSMUST00000120676 801 ntBASIC18.65■□□□□ 0.58
Soga1E1U8D0 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Soga1E1U8D0 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC18.65■□□□□ 0.58
Soga1E1U8D0 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC18.65■□□□□ 0.58
Soga1E1U8D0 Gm17192-201ENSMUST00000169031 511 ntBASIC18.65■□□□□ 0.58
Soga1E1U8D0 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Soga1E1U8D0 Gm45592-201ENSMUST00000209605 1043 ntBASIC18.65■□□□□ 0.58
Soga1E1U8D0 Gm7082-201ENSMUST00000209880 969 ntBASIC18.65■□□□□ 0.58
Soga1E1U8D0 Arhgef33-210ENSMUST00000225548 456 ntBASIC18.65■□□□□ 0.58
Soga1E1U8D0 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Soga1E1U8D0 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Soga1E1U8D0 Gm4900-201ENSMUST00000222046 1628 ntBASIC18.65■□□□□ 0.58
Soga1E1U8D0 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Soga1E1U8D0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Soga1E1U8D0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Soga1E1U8D0 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Soga1E1U8D0 Gm10728-201ENSMUST00000194292 1829 ntBASIC18.64■□□□□ 0.57
Soga1E1U8D0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Soga1E1U8D0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Soga1E1U8D0 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Soga1E1U8D0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Soga1E1U8D0 Gm11783-201ENSMUST00000119549 885 ntBASIC18.64■□□□□ 0.57
Soga1E1U8D0 Gm5555-201ENSMUST00000120352 1111 ntBASIC18.64■□□□□ 0.57
Soga1E1U8D0 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC18.64■□□□□ 0.57
Soga1E1U8D0 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Soga1E1U8D0 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC18.64■□□□□ 0.57
Soga1E1U8D0 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Soga1E1U8D0 Gm8574-201ENSMUST00000203207 924 ntBASIC18.64■□□□□ 0.57
Soga1E1U8D0 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Soga1E1U8D0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Soga1E1U8D0 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Soga1E1U8D0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Soga1E1U8D0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC18.63■□□□□ 0.57
Soga1E1U8D0 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Soga1E1U8D0 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Soga1E1U8D0 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Soga1E1U8D0 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Soga1E1U8D0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Soga1E1U8D0 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Soga1E1U8D0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Soga1E1U8D0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Soga1E1U8D0 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Soga1E1U8D0 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Soga1E1U8D0 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC18.63■□□□□ 0.57
Soga1E1U8D0 Gm22594-201ENSMUST00000104251 130 ntBASIC18.63■□□□□ 0.57
Soga1E1U8D0 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms