Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Gm15824-201ENSMUST00000119516 955 ntBASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Gm13829-201ENSMUST00000119600 138 ntBASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Gm22121-201ENSMUST00000175148 54 ntBASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Gm43433-201ENSMUST00000196573 481 ntBASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Gm4768-201ENSMUST00000206199 686 ntBASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28043E0CXC2 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Gm27682-201ENSMUST00000183930 110 ntBASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Gm5186-201ENSMUST00000218781 920 ntBASIC12.36□□□□□ -0.43
Gm28043E0CXC2 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.36□□□□□ -0.43
Gm28043E0CXC2 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.36□□□□□ -0.43
Gm28043E0CXC2 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28043E0CXC2 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms