Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hfm1D3Z4R1 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hfm1D3Z4R1 AC160405.1-201ENSMUST00000218207 1545 ntBASIC17■□□□□ 0.31
Hfm1D3Z4R1 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC17■□□□□ 0.31
Hfm1D3Z4R1 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Hfm1D3Z4R1 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC17■□□□□ 0.31
Hfm1D3Z4R1 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hfm1D3Z4R1 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hfm1D3Z4R1 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hfm1D3Z4R1 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Hfm1D3Z4R1 Gm15615-201ENSMUST00000118876 198 ntBASIC17■□□□□ 0.31
Hfm1D3Z4R1 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC17■□□□□ 0.31
Hfm1D3Z4R1 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hfm1D3Z4R1 Gm10807-201ENSMUST00000177134 795 ntBASIC17■□□□□ 0.31
Hfm1D3Z4R1 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Hfm1D3Z4R1 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC17■□□□□ 0.31
Hfm1D3Z4R1 Gm18561-201ENSMUST00000206027 804 ntBASIC17■□□□□ 0.31
Hfm1D3Z4R1 Gm4811-201ENSMUST00000220879 1220 ntBASIC17■□□□□ 0.31
Hfm1D3Z4R1 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hfm1D3Z4R1 AC154572.1-201ENSMUST00000226098 1204 ntBASIC17■□□□□ 0.31
Hfm1D3Z4R1 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hfm1D3Z4R1 Gm37348-201ENSMUST00000193104 1789 ntBASIC17■□□□□ 0.31
Hfm1D3Z4R1 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC17■□□□□ 0.31
Hfm1D3Z4R1 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC17■□□□□ 0.31
Hfm1D3Z4R1 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hfm1D3Z4R1 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Hfm1D3Z4R1 Gm8038-201ENSMUST00000164674 2044 ntBASIC17■□□□□ 0.31
Hfm1D3Z4R1 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Hfm1D3Z4R1 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hfm1D3Z4R1 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Hfm1D3Z4R1 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hfm1D3Z4R1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 Gm14807-201ENSMUST00000116640 983 ntBASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 Gm5257-201ENSMUST00000121823 790 ntBASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 Gm45758-201ENSMUST00000212448 1006 ntBASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 n-R5s185-201ENSMUST00000083953 119 ntBASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 Grk6-205ENSMUST00000224653 2976 ntBASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 Gm21358-201ENSMUST00000191645 1659 ntBASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hfm1D3Z4R1 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 Gm14274-201ENSMUST00000117182 615 ntBASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 Gm42816-201ENSMUST00000198433 325 ntBASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 Gm43912-201ENSMUST00000204352 538 ntBASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 Gm45592-201ENSMUST00000209605 1043 ntBASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 AC098716.1-201ENSMUST00000213527 703 ntBASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 CT009546.1-201ENSMUST00000222573 1120 ntBASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Hfm1D3Z4R1 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 AC130823.1-201ENSMUST00000228929 1549 ntBASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Gm11979-201ENSMUST00000119629 743 ntBASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Gm28937-201ENSMUST00000185413 695 ntBASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Gm29400-201ENSMUST00000187208 695 ntBASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Gm28662-201ENSMUST00000188446 695 ntBASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Gm28251-201ENSMUST00000188835 695 ntBASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Gm37318-201ENSMUST00000194325 695 ntBASIC16.97■□□□□ 0.31
Hfm1D3Z4R1 Gm38017-201ENSMUST00000194768 695 ntBASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 264.8 ms