Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.23□□□□□ -0.13
Clrn2B2RVW2 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn2B2RVW2 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn2B2RVW2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn2B2RVW2 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Clrn2B2RVW2 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Gm4726-201ENSMUST00000135604 736 ntBASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Gm6019-201ENSMUST00000148369 736 ntBASIC14.22□□□□□ -0.13
Clrn2B2RVW2 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Gm9797-202ENSMUST00000218003 294 ntBASIC14.22□□□□□ -0.13
Clrn2B2RVW2 AC151275.1-201ENSMUST00000224870 585 ntBASIC14.22□□□□□ -0.13
Clrn2B2RVW2 AC171241.1-201ENSMUST00000228144 1166 ntBASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Clrn2B2RVW2 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Clrn2B2RVW2 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn2B2RVW2 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.21□□□□□ -0.13
Clrn2B2RVW2 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn2B2RVW2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn2B2RVW2 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn2B2RVW2 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn2B2RVW2 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.21□□□□□ -0.13
Clrn2B2RVW2 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC14.21□□□□□ -0.13
Clrn2B2RVW2 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.21□□□□□ -0.13
Clrn2B2RVW2 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn2B2RVW2 Gm11511-201ENSMUST00000118146 540 ntBASIC14.21□□□□□ -0.13
Clrn2B2RVW2 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC14.21□□□□□ -0.13
Clrn2B2RVW2 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC14.21□□□□□ -0.13
Clrn2B2RVW2 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.21□□□□□ -0.13
Clrn2B2RVW2 Gm22144-201ENSMUST00000157402 102 ntBASIC14.21□□□□□ -0.13
Clrn2B2RVW2 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn2B2RVW2 Ighv1-48-201ENSMUST00000191795 294 ntBASIC14.21□□□□□ -0.13
Clrn2B2RVW2 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn2B2RVW2 Gm9463-201ENSMUST00000206707 601 ntBASIC14.21□□□□□ -0.13
Clrn2B2RVW2 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.21□□□□□ -0.13
Clrn2B2RVW2 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC14.21□□□□□ -0.13
Clrn2B2RVW2 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn2B2RVW2 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn2B2RVW2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn2B2RVW2 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Clrn2B2RVW2 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.21□□□□□ -0.14
Clrn2B2RVW2 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC14.21□□□□□ -0.14
Clrn2B2RVW2 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Clrn2B2RVW2 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.21□□□□□ -0.14
Clrn2B2RVW2 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn2B2RVW2 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Gm11956-201ENSMUST00000119525 512 ntBASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Gm8194-201ENSMUST00000159783 859 ntBASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Gm38228-201ENSMUST00000193169 1293 ntBASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Gm7600-201ENSMUST00000209657 785 ntBASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Gm45398-201ENSMUST00000210561 165 ntBASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC14.2□□□□□ -0.14
Clrn2B2RVW2 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms