Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb3S4R1G7 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Gm26927-201ENSMUST00000182385 965 ntBASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Gm38092-201ENSMUST00000195600 653 ntBASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Gm10268-201ENSMUST00000085340 555 ntBASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Gm6091-201ENSMUST00000098307 165 ntBASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb3S4R1G7 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Daam2-202ENSMUST00000224595 1926 ntBASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms