Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Gm6023-201ENSMUST00000118217 606 ntBASIC10.99□□□□□ -0.65
Nubp2Q9R061 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Nubp2Q9R061 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nubp2Q9R061 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.98□□□□□ -0.65
Nubp2Q9R061 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nubp2Q9R061 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.98□□□□□ -0.65
Nubp2Q9R061 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nubp2Q9R061 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Gm13813-201ENSMUST00000120998 787 ntBASIC10.98□□□□□ -0.65
Nubp2Q9R061 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Gm3890-201ENSMUST00000182416 207 ntBASIC10.98□□□□□ -0.65
Nubp2Q9R061 Gm27516-201ENSMUST00000184237 98 ntBASIC10.98□□□□□ -0.65
Nubp2Q9R061 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Gm29396-201ENSMUST00000185659 716 ntBASIC10.98□□□□□ -0.65
Nubp2Q9R061 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Olfr284-202ENSMUST00000206647 966 ntBASIC10.98□□□□□ -0.65
Nubp2Q9R061 Gm9368-201ENSMUST00000219348 831 ntBASIC10.98□□□□□ -0.65
Nubp2Q9R061 Gm5781-201ENSMUST00000219792 443 ntBASIC10.98□□□□□ -0.65
Nubp2Q9R061 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.98□□□□□ -0.65
Nubp2Q9R061 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.98□□□□□ -0.65
Nubp2Q9R061 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.98□□□□□ -0.65
Nubp2Q9R061 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.98□□□□□ -0.65
Nubp2Q9R061 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nubp2Q9R061 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.98□□□□□ -0.65
Nubp2Q9R061 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nubp2Q9R061 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Nubp2Q9R061 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Nubp2Q9R061 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nubp2Q9R061 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nubp2Q9R061 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nubp2Q9R061 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nubp2Q9R061 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.97□□□□□ -0.65
Nubp2Q9R061 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nubp2Q9R061 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Nubp2Q9R061 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.97□□□□□ -0.65
Nubp2Q9R061 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nubp2Q9R061 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nubp2Q9R061 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.97□□□□□ -0.65
Nubp2Q9R061 Gm12241-201ENSMUST00000118330 726 ntBASIC10.97□□□□□ -0.65
Nubp2Q9R061 Gm14723-201ENSMUST00000118686 215 ntBASIC10.97□□□□□ -0.65
Nubp2Q9R061 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nubp2Q9R061 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.97□□□□□ -0.65
Nubp2Q9R061 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Nubp2Q9R061 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.97□□□□□ -0.65
Nubp2Q9R061 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nubp2Q9R061 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.97□□□□□ -0.65
Nubp2Q9R061 Gm43822-201ENSMUST00000200285 476 ntBASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms