Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trim54Q9ERP3 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim54Q9ERP3 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim54Q9ERP3 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim54Q9ERP3 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim54Q9ERP3 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim54Q9ERP3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.38□□□□□ -0.27
Trim54Q9ERP3 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim54Q9ERP3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Gm22334-201ENSMUST00000158070 133 ntBASIC13.37□□□□□ -0.27
Trim54Q9ERP3 AY036118-201ENSMUST00000200021 923 ntBASIC13.37□□□□□ -0.27
Trim54Q9ERP3 AU022133-201ENSMUST00000200601 873 ntBASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Gm8959-201ENSMUST00000213150 571 ntBASIC13.37□□□□□ -0.27
Trim54Q9ERP3 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim54Q9ERP3 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Gm23699-201ENSMUST00000158835 135 ntBASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Gm19994-201ENSMUST00000217086 586 ntBASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.36□□□□□ -0.27
Trim54Q9ERP3 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim54Q9ERP3 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim54Q9ERP3 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim54Q9ERP3 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim54Q9ERP3 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim54Q9ERP3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim54Q9ERP3 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim54Q9ERP3 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim54Q9ERP3 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim54Q9ERP3 Gm24934-201ENSMUST00000103764 111 ntBASIC13.35□□□□□ -0.27
Trim54Q9ERP3 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Trim54Q9ERP3 Gm11989-201ENSMUST00000117240 672 ntBASIC13.35□□□□□ -0.27
Trim54Q9ERP3 Gm11362-201ENSMUST00000118838 850 ntBASIC13.35□□□□□ -0.27
Trim54Q9ERP3 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim54Q9ERP3 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim54Q9ERP3 Gm5616-201ENSMUST00000165252 384 ntBASIC13.35□□□□□ -0.27
Trim54Q9ERP3 Gm8741-201ENSMUST00000174736 384 ntBASIC13.35□□□□□ -0.27
Trim54Q9ERP3 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim54Q9ERP3 Gm28071-201ENSMUST00000190355 478 ntBASIC13.35□□□□□ -0.27
Trim54Q9ERP3 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.35□□□□□ -0.27
Trim54Q9ERP3 Gm44958-201ENSMUST00000203734 736 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms