Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn3Q9DCB1 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Gm14350-201ENSMUST00000116642 640 ntBASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Gm14719-201ENSMUST00000121891 340 ntBASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Gm24694-201ENSMUST00000180054 110 ntBASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Gm27663-201ENSMUST00000184839 110 ntBASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hmgn3Q9DCB1 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Gm15920-201ENSMUST00000118998 402 ntBASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Gm5279-201ENSMUST00000199575 745 ntBASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Gm9797-201ENSMUST00000052902 613 ntBASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Gm5867-201ENSMUST00000063197 592 ntBASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Hmgn3Q9DCB1 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms