Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Gm22058-201ENSMUST00000083393 310 ntBASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.48□□□□□ -0.57
Cdc40Q9DC48 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdc40Q9DC48 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Gm15703-201ENSMUST00000120250 880 ntBASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Gm38092-201ENSMUST00000195600 653 ntBASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.47□□□□□ -0.57
Cdc40Q9DC48 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdc40Q9DC48 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdc40Q9DC48 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdc40Q9DC48 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdc40Q9DC48 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cdc40Q9DC48 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cdc40Q9DC48 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdc40Q9DC48 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdc40Q9DC48 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdc40Q9DC48 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdc40Q9DC48 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdc40Q9DC48 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdc40Q9DC48 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cdc40Q9DC48 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdc40Q9DC48 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdc40Q9DC48 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdc40Q9DC48 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cdc40Q9DC48 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.46□□□□□ -0.57
Cdc40Q9DC48 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.46□□□□□ -0.57
Cdc40Q9DC48 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdc40Q9DC48 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdc40Q9DC48 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdc40Q9DC48 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.46□□□□□ -0.57
Cdc40Q9DC48 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.46□□□□□ -0.57
Cdc40Q9DC48 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdc40Q9DC48 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.46□□□□□ -0.57
Cdc40Q9DC48 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.46□□□□□ -0.57
Cdc40Q9DC48 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdc40Q9DC48 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdc40Q9DC48 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdc40Q9DC48 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms