Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3a3Q9D554 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.45□□□□□ -0.42
Sf3a3Q9D554 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3a3Q9D554 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3a3Q9D554 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3a3Q9D554 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3a3Q9D554 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3a3Q9D554 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3a3Q9D554 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.45□□□□□ -0.42
Sf3a3Q9D554 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.45□□□□□ -0.42
Sf3a3Q9D554 Gm27680-201ENSMUST00000184192 160 ntBASIC12.45□□□□□ -0.42
Sf3a3Q9D554 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3a3Q9D554 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.45□□□□□ -0.42
Sf3a3Q9D554 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3a3Q9D554 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Sf3a3Q9D554 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3a3Q9D554 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3a3Q9D554 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3a3Q9D554 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3a3Q9D554 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3a3Q9D554 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.45□□□□□ -0.42
Sf3a3Q9D554 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3a3Q9D554 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3a3Q9D554 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3a3Q9D554 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3a3Q9D554 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3a3Q9D554 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Gm9063-201ENSMUST00000223299 582 ntBASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.44□□□□□ -0.42
Sf3a3Q9D554 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Gm13223-201ENSMUST00000118609 747 ntBASIC12.43□□□□□ -0.42
Sf3a3Q9D554 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Gm27741-201ENSMUST00000185060 237 ntBASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Gm5279-201ENSMUST00000199575 745 ntBASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.43□□□□□ -0.42
Sf3a3Q9D554 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.43□□□□□ -0.42
Sf3a3Q9D554 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms