Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Stag1Q9D3E6 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Gm270-201ENSMUST00000223010 976 ntBASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 AC154680.1-201ENSMUST00000224376 859 ntBASIC14.68□□□□□ -0.06
Stag1Q9D3E6 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Stag1Q9D3E6 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Mir1943-201ENSMUST00000158276 73 ntBASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Mir7677-201ENSMUST00000184226 67 ntBASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Gm9555-201ENSMUST00000200908 583 ntBASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Gm5369-201ENSMUST00000217499 588 ntBASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Gm14267-206ENSMUST00000226870 1209 ntBASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 AC159308.2-201ENSMUST00000213592 2325 ntBASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Stag1Q9D3E6 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Stag1Q9D3E6 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Stag1Q9D3E6 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms