Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Gm14704-201ENSMUST00000120300 874 ntBASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.4□□□□□ -0.58
Trim13Q9CYB0 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.4□□□□□ -0.58
Trim13Q9CYB0 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trim13Q9CYB0 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trim13Q9CYB0 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Trim13Q9CYB0 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trim13Q9CYB0 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trim13Q9CYB0 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trim13Q9CYB0 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trim13Q9CYB0 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Gm35960-201ENSMUST00000202712 767 ntBASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.39□□□□□ -0.59
Trim13Q9CYB0 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim13Q9CYB0 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Gm11618-201ENSMUST00000117946 267 ntBASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Gm42599-201ENSMUST00000201308 469 ntBASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim13Q9CYB0 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms