Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Gm28911-201ENSMUST00000188837 117 ntBASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.22□□□□□ -0.45
Ssu72Q9CY97 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.22□□□□□ -0.45
Ssu72Q9CY97 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssu72Q9CY97 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Gm24830-201ENSMUST00000102024 166 ntBASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Gm12859-201ENSMUST00000117834 427 ntBASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.21□□□□□ -0.45
Ssu72Q9CY97 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Gm45930-201ENSMUST00000221330 292 ntBASIC12.21□□□□□ -0.45
Ssu72Q9CY97 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Gm10012-201ENSMUST00000078252 192 ntBASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Gm26232-201ENSMUST00000083360 166 ntBASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ssu72Q9CY97 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ssu72Q9CY97 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ssu72Q9CY97 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ssu72Q9CY97 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ssu72Q9CY97 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ssu72Q9CY97 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ssu72Q9CY97 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ssu72Q9CY97 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ssu72Q9CY97 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.21□□□□□ -0.46
Ssu72Q9CY97 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.21□□□□□ -0.46
Ssu72Q9CY97 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ssu72Q9CY97 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ssu72Q9CY97 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Ssu72Q9CY97 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Gm15920-201ENSMUST00000118998 402 ntBASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Gm14057-201ENSMUST00000120631 482 ntBASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.2□□□□□ -0.46
Ssu72Q9CY97 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ssu72Q9CY97 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms