Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm7Q9CQQ8 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Lsm7Q9CQQ8 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm7Q9CQQ8 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.46□□□□□ -0.42
Lsm7Q9CQQ8 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm7Q9CQQ8 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm7Q9CQQ8 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm7Q9CQQ8 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm7Q9CQQ8 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Lsm7Q9CQQ8 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm7Q9CQQ8 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm7Q9CQQ8 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm7Q9CQQ8 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.46□□□□□ -0.42
Lsm7Q9CQQ8 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm7Q9CQQ8 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Gm14208-201ENSMUST00000119645 678 ntBASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Gm26461-201ENSMUST00000175064 290 ntBASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Gm19994-201ENSMUST00000217086 586 ntBASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Gm18730-201ENSMUST00000218038 343 ntBASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm7Q9CQQ8 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms