Protein–RNA interactions for Protein: Q99PV5

Bhlhe41, Class E basic helix-loop-helix protein 41, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe41Q99PV5 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.27□□□□□ -0.6
Bhlhe41Q99PV5 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Bhlhe41Q99PV5 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Bhlhe41Q99PV5 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Bhlhe41Q99PV5 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.27□□□□□ -0.6
Bhlhe41Q99PV5 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Mir1247-201ENSMUST00000116706 82 ntBASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Gm12742-201ENSMUST00000117326 410 ntBASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Gm27243-201ENSMUST00000183964 521 ntBASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Gm45880-201ENSMUST00000213041 853 ntBASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Bhlhe41Q99PV5 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Gm13392-201ENSMUST00000117708 150 ntBASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Gm12314-201ENSMUST00000118104 538 ntBASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Gm11793-201ENSMUST00000120433 981 ntBASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Gm13342-201ENSMUST00000121055 207 ntBASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Gm9022-201ENSMUST00000182482 992 ntBASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
Bhlhe41Q99PV5 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Bhlhe41Q99PV5 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Bhlhe41Q99PV5 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Bhlhe41Q99PV5 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Bhlhe41Q99PV5 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Bhlhe41Q99PV5 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Bhlhe41Q99PV5 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Bhlhe41Q99PV5 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms