Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim16Q99PP9 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trim16Q99PP9 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.09□□□□□ -0.47
Trim16Q99PP9 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim16Q99PP9 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.09□□□□□ -0.47
Trim16Q99PP9 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim16Q99PP9 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Trim16Q99PP9 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trim16Q99PP9 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Gm22018-201ENSMUST00000104357 131 ntBASIC12.08□□□□□ -0.48
Trim16Q99PP9 Gm14921-201ENSMUST00000118643 908 ntBASIC12.08□□□□□ -0.48
Trim16Q99PP9 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Gm8062-201ENSMUST00000139696 444 ntBASIC12.08□□□□□ -0.48
Trim16Q99PP9 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.08□□□□□ -0.48
Trim16Q99PP9 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.08□□□□□ -0.48
Trim16Q99PP9 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.08□□□□□ -0.48
Trim16Q99PP9 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.08□□□□□ -0.48
Trim16Q99PP9 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim16Q99PP9 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trim16Q99PP9 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Gm12742-201ENSMUST00000117326 410 ntBASIC12.07□□□□□ -0.48
Trim16Q99PP9 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Gm7809-201ENSMUST00000153199 742 ntBASIC12.07□□□□□ -0.48
Trim16Q99PP9 Gm16379-201ENSMUST00000161469 348 ntBASIC12.07□□□□□ -0.48
Trim16Q99PP9 Gm8762-201ENSMUST00000193486 339 ntBASIC12.07□□□□□ -0.48
Trim16Q99PP9 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim16Q99PP9 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trim16Q99PP9 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim16Q99PP9 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms