Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Gm11793-201ENSMUST00000120433 981 ntBASIC12.32□□□□□ -0.44
Trim33Q99PP7 Gm11964-201ENSMUST00000120982 444 ntBASIC12.32□□□□□ -0.44
Trim33Q99PP7 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.32□□□□□ -0.44
Trim33Q99PP7 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Gm42693-201ENSMUST00000196779 631 ntBASIC12.32□□□□□ -0.44
Trim33Q99PP7 Gm43630-201ENSMUST00000201550 776 ntBASIC12.32□□□□□ -0.44
Trim33Q99PP7 Gm43371-201ENSMUST00000202838 1031 ntBASIC12.32□□□□□ -0.44
Trim33Q99PP7 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.32□□□□□ -0.44
Trim33Q99PP7 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim33Q99PP7 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.32□□□□□ -0.44
Trim33Q99PP7 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim33Q99PP7 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.31□□□□□ -0.44
Trim33Q99PP7 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim33Q99PP7 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim33Q99PP7 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Gm15703-201ENSMUST00000120250 880 ntBASIC12.31□□□□□ -0.44
Trim33Q99PP7 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.31□□□□□ -0.44
Trim33Q99PP7 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.31□□□□□ -0.44
Trim33Q99PP7 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim33Q99PP7 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Gm28195-201ENSMUST00000186992 372 ntBASIC12.31□□□□□ -0.44
Trim33Q99PP7 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Gm45359-201ENSMUST00000210635 427 ntBASIC12.31□□□□□ -0.44
Trim33Q99PP7 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.31□□□□□ -0.44
Trim33Q99PP7 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trim33Q99PP7 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.31□□□□□ -0.44
Trim33Q99PP7 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.31□□□□□ -0.44
Trim33Q99PP7 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.31□□□□□ -0.44
Trim33Q99PP7 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.31□□□□□ -0.44
Trim33Q99PP7 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.31□□□□□ -0.44
Trim33Q99PP7 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Trim33Q99PP7 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim33Q99PP7 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.3□□□□□ -0.44
Trim33Q99PP7 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim33Q99PP7 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms