Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem2Q99NH8 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem2Q99NH8 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trem2Q99NH8 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trem2Q99NH8 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.54□□□□□ -0.4
Trem2Q99NH8 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.54□□□□□ -0.4
Trem2Q99NH8 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem2Q99NH8 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trem2Q99NH8 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.54□□□□□ -0.4
Trem2Q99NH8 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trem2Q99NH8 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem2Q99NH8 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem2Q99NH8 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.54□□□□□ -0.4
Trem2Q99NH8 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trem2Q99NH8 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem2Q99NH8 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem2Q99NH8 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trem2Q99NH8 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trem2Q99NH8 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.54□□□□□ -0.4
Trem2Q99NH8 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem2Q99NH8 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem2Q99NH8 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trem2Q99NH8 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem2Q99NH8 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trem2Q99NH8 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.53□□□□□ -0.4
Trem2Q99NH8 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trem2Q99NH8 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem2Q99NH8 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem2Q99NH8 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trem2Q99NH8 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trem2Q99NH8 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trem2Q99NH8 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Trem2Q99NH8 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trem2Q99NH8 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.53□□□□□ -0.4
Trem2Q99NH8 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.53□□□□□ -0.4
Trem2Q99NH8 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.53□□□□□ -0.4
Trem2Q99NH8 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem2Q99NH8 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem2Q99NH8 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem2Q99NH8 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem2Q99NH8 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trem2Q99NH8 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trem2Q99NH8 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trem2Q99NH8 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem2Q99NH8 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trem2Q99NH8 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trem2Q99NH8 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem2Q99NH8 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.53□□□□□ -0.4
Trem2Q99NH8 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem2Q99NH8 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem2Q99NH8 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem2Q99NH8 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trem2Q99NH8 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trem2Q99NH8 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Trem2Q99NH8 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trem2Q99NH8 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trem2Q99NH8 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trem2Q99NH8 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.52□□□□□ -0.4
Trem2Q99NH8 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trem2Q99NH8 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trem2Q99NH8 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trem2Q99NH8 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trem2Q99NH8 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trem2Q99NH8 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trem2Q99NH8 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trem2Q99NH8 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trem2Q99NH8 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trem2Q99NH8 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.52□□□□□ -0.4
Trem2Q99NH8 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trem2Q99NH8 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.52□□□□□ -0.41
Trem2Q99NH8 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.52□□□□□ -0.41
Trem2Q99NH8 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.52□□□□□ -0.41
Trem2Q99NH8 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.52□□□□□ -0.41
Trem2Q99NH8 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.52□□□□□ -0.41
Trem2Q99NH8 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.52□□□□□ -0.41
Trem2Q99NH8 Gm42627-201ENSMUST00000197347 224 ntBASIC12.52□□□□□ -0.41
Trem2Q99NH8 Gm19994-201ENSMUST00000217086 586 ntBASIC12.52□□□□□ -0.41
Trem2Q99NH8 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trem2Q99NH8 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.52□□□□□ -0.41
Trem2Q99NH8 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trem2Q99NH8 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.52□□□□□ -0.41
Trem2Q99NH8 Morn2-202ENSMUST00000227729 656 ntBASIC12.52□□□□□ -0.41
Trem2Q99NH8 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trem2Q99NH8 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.52□□□□□ -0.41
Trem2Q99NH8 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trem2Q99NH8 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.52□□□□□ -0.41
Trem2Q99NH8 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.52□□□□□ -0.41
Trem2Q99NH8 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trem2Q99NH8 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trem2Q99NH8 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trem2Q99NH8 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Trem2Q99NH8 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
Trem2Q99NH8 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trem2Q99NH8 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trem2Q99NH8 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trem2Q99NH8 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Trem2Q99NH8 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Trem2Q99NH8 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trem2Q99NH8 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trem2Q99NH8 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms