Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb2Q91Y00 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Gm14832-201ENSMUST00000121289 322 ntBASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Gm14760-201ENSMUST00000121831 999 ntBASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Gm23958-201ENSMUST00000157207 105 ntBASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Gm13097-201ENSMUST00000210722 397 ntBASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Gm18363-201ENSMUST00000221671 730 ntBASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Gm24136-201ENSMUST00000083374 165 ntBASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb2Q91Y00 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Gm9083-201ENSMUST00000120423 819 ntBASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb2Q91Y00 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb2Q91Y00 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhb2Q91Y00 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms