Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb6Q91XZ4 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb6Q91XZ4 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb6Q91XZ4 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.66□□□□□ -0.38
Pcdhb6Q91XZ4 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb6Q91XZ4 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb6Q91XZ4 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb6Q91XZ4 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb6Q91XZ4 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb6Q91XZ4 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb6Q91XZ4 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb6Q91XZ4 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb6Q91XZ4 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdhb6Q91XZ4 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.65□□□□□ -0.38
Pcdhb6Q91XZ4 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdhb6Q91XZ4 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Gm23912-201ENSMUST00000104687 87 ntBASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Gm13323-201ENSMUST00000120245 1151 ntBASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Gm19994-201ENSMUST00000217086 586 ntBASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb6Q91XZ4 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb6Q91XZ4 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms