Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lims2Q91XD2 Map1b-203ENSMUST00000223725 2669 ntBASIC12.54□□□□□ -0.4
Lims2Q91XD2 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lims2Q91XD2 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lims2Q91XD2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.53□□□□□ -0.4
Lims2Q91XD2 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Gm23200-201ENSMUST00000104379 132 ntBASIC12.53□□□□□ -0.4
Lims2Q91XD2 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.53□□□□□ -0.4
Lims2Q91XD2 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.53□□□□□ -0.4
Lims2Q91XD2 Gm15004-201ENSMUST00000119192 630 ntBASIC12.53□□□□□ -0.4
Lims2Q91XD2 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.53□□□□□ -0.4
Lims2Q91XD2 AU022133-201ENSMUST00000200601 873 ntBASIC12.53□□□□□ -0.4
Lims2Q91XD2 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Gm17931-201ENSMUST00000208132 634 ntBASIC12.53□□□□□ -0.4
Lims2Q91XD2 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.53□□□□□ -0.4
Lims2Q91XD2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lims2Q91XD2 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.53□□□□□ -0.4
Lims2Q91XD2 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lims2Q91XD2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lims2Q91XD2 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.52□□□□□ -0.4
Lims2Q91XD2 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Lims2Q91XD2 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lims2Q91XD2 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lims2Q91XD2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lims2Q91XD2 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Lims2Q91XD2 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lims2Q91XD2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lims2Q91XD2 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lims2Q91XD2 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lims2Q91XD2 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Lims2Q91XD2 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims2Q91XD2 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lims2Q91XD2 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.52□□□□□ -0.41
Lims2Q91XD2 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.52□□□□□ -0.41
Lims2Q91XD2 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Lims2Q91XD2 Gm12266-201ENSMUST00000120311 962 ntBASIC12.52□□□□□ -0.41
Lims2Q91XD2 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lims2Q91XD2 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lims2Q91XD2 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.52□□□□□ -0.41
Lims2Q91XD2 Gm25732-201ENSMUST00000175168 60 ntBASIC12.52□□□□□ -0.41
Lims2Q91XD2 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lims2Q91XD2 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Lims2Q91XD2 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.52□□□□□ -0.41
Lims2Q91XD2 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
Lims2Q91XD2 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims2Q91XD2 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lims2Q91XD2 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims2Q91XD2 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.52□□□□□ -0.41
Lims2Q91XD2 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims2Q91XD2 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims2Q91XD2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims2Q91XD2 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims2Q91XD2 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lims2Q91XD2 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.52□□□□□ -0.41
Lims2Q91XD2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims2Q91XD2 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims2Q91XD2 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.52□□□□□ -0.41
Lims2Q91XD2 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims2Q91XD2 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims2Q91XD2 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims2Q91XD2 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Lims2Q91XD2 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims2Q91XD2 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lims2Q91XD2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.51□□□□□ -0.41
Lims2Q91XD2 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lims2Q91XD2 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lims2Q91XD2 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lims2Q91XD2 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lims2Q91XD2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Lims2Q91XD2 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lims2Q91XD2 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms