Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Vsx1Q91V10 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC12.22□□□□□ -0.45
Vsx1Q91V10 Gm45550-201ENSMUST00000209380 946 ntBASIC12.22□□□□□ -0.45
Vsx1Q91V10 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.22□□□□□ -0.45
Vsx1Q91V10 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Gm21811-201ENSMUST00000096485 930 ntBASIC12.22□□□□□ -0.45
Vsx1Q91V10 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.22□□□□□ -0.45
Vsx1Q91V10 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.22□□□□□ -0.45
Vsx1Q91V10 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vsx1Q91V10 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Vsx1Q91V10 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx1Q91V10 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx1Q91V10 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx1Q91V10 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx1Q91V10 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx1Q91V10 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx1Q91V10 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx1Q91V10 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Vsx1Q91V10 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx1Q91V10 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx1Q91V10 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Vsx1Q91V10 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Vsx1Q91V10 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx1Q91V10 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Vsx1Q91V10 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx1Q91V10 Gm12501-201ENSMUST00000119163 529 ntBASIC12.21□□□□□ -0.45
Vsx1Q91V10 Gm13315-201ENSMUST00000120376 991 ntBASIC12.21□□□□□ -0.45
Vsx1Q91V10 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Vsx1Q91V10 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx1Q91V10 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC12.21□□□□□ -0.45
Vsx1Q91V10 Mir7221-201ENSMUST00000184009 72 ntBASIC12.21□□□□□ -0.45
Vsx1Q91V10 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.21□□□□□ -0.45
Vsx1Q91V10 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.21□□□□□ -0.45
Vsx1Q91V10 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx1Q91V10 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx1Q91V10 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.21□□□□□ -0.45
Vsx1Q91V10 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.21□□□□□ -0.45
Vsx1Q91V10 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx1Q91V10 Ginm1-202ENSMUST00000065124 300 ntBASIC12.21□□□□□ -0.45
Vsx1Q91V10 Mir339-201ENSMUST00000083659 96 ntBASIC12.21□□□□□ -0.45
Vsx1Q91V10 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Vsx1Q91V10 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Vsx1Q91V10 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx1Q91V10 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vsx1Q91V10 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vsx1Q91V10 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.21□□□□□ -0.46
Vsx1Q91V10 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Vsx1Q91V10 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Vsx1Q91V10 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.21□□□□□ -0.46
Vsx1Q91V10 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vsx1Q91V10 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vsx1Q91V10 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Vsx1Q91V10 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vsx1Q91V10 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vsx1Q91V10 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vsx1Q91V10 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.21□□□□□ -0.46
Vsx1Q91V10 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Vsx1Q91V10 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Vsx1Q91V10 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx1Q91V10 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.2□□□□□ -0.46
Vsx1Q91V10 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Gm34023-201ENSMUST00000195539 217 ntBASIC12.2□□□□□ -0.46
Vsx1Q91V10 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.2□□□□□ -0.46
Vsx1Q91V10 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Gm9463-201ENSMUST00000206707 601 ntBASIC12.2□□□□□ -0.46
Vsx1Q91V10 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.2□□□□□ -0.46
Vsx1Q91V10 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms