Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clrn1Q8K445 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Gm13570-201ENSMUST00000140763 309 ntBASIC11.63□□□□□ -0.55
Clrn1Q8K445 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Gm27501-201ENSMUST00000183599 107 ntBASIC11.63□□□□□ -0.55
Clrn1Q8K445 Gm43630-201ENSMUST00000201550 776 ntBASIC11.63□□□□□ -0.55
Clrn1Q8K445 Gm44958-201ENSMUST00000203734 736 ntBASIC11.63□□□□□ -0.55
Clrn1Q8K445 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.63□□□□□ -0.55
Clrn1Q8K445 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.63□□□□□ -0.55
Clrn1Q8K445 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.63□□□□□ -0.55
Clrn1Q8K445 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clrn1Q8K445 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn1Q8K445 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Gm13297-201ENSMUST00000120205 934 ntBASIC11.62□□□□□ -0.55
Clrn1Q8K445 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Gm25043-201ENSMUST00000158604 212 ntBASIC11.62□□□□□ -0.55
Clrn1Q8K445 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.62□□□□□ -0.55
Clrn1Q8K445 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.62□□□□□ -0.55
Clrn1Q8K445 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.62□□□□□ -0.55
Clrn1Q8K445 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.62□□□□□ -0.55
Clrn1Q8K445 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clrn1Q8K445 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.61□□□□□ -0.55
Clrn1Q8K445 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn1Q8K445 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Clrn1Q8K445 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn1Q8K445 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clrn1Q8K445 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 229.2 ms