Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cchcr1Q8K2I2 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.58□□□□□ -0.08
Cchcr1Q8K2I2 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cchcr1Q8K2I2 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cchcr1Q8K2I2 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cchcr1Q8K2I2 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cchcr1Q8K2I2 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cchcr1Q8K2I2 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cchcr1Q8K2I2 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.57□□□□□ -0.08
Cchcr1Q8K2I2 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cchcr1Q8K2I2 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cchcr1Q8K2I2 Gm25261-201ENSMUST00000157416 134 ntBASIC14.57□□□□□ -0.08
Cchcr1Q8K2I2 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cchcr1Q8K2I2 Gm6266-201ENSMUST00000203844 806 ntBASIC14.57□□□□□ -0.08
Cchcr1Q8K2I2 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cchcr1Q8K2I2 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cchcr1Q8K2I2 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cchcr1Q8K2I2 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cchcr1Q8K2I2 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cchcr1Q8K2I2 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cchcr1Q8K2I2 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cchcr1Q8K2I2 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cchcr1Q8K2I2 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cchcr1Q8K2I2 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cchcr1Q8K2I2 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cchcr1Q8K2I2 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cchcr1Q8K2I2 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Cchcr1Q8K2I2 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cchcr1Q8K2I2 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Gm27731-201ENSMUST00000185192 107 ntBASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cchcr1Q8K2I2 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Gm11424-201ENSMUST00000121929 829 ntBASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Gm45784-201ENSMUST00000188360 142 ntBASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cchcr1Q8K2I2 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms