Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 Gm6007-201ENSMUST00000208170 823 ntBASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 Gm17794-201ENSMUST00000220252 955 ntBASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ccdc28aQ8CEI3 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Gm11918-201ENSMUST00000121660 179 ntBASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Mir1894-201ENSMUST00000122802 81 ntBASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Gm4271-201ENSMUST00000174444 973 ntBASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.97□□□□□ -0.33
Ccdc28aQ8CEI3 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Gm6244-201ENSMUST00000178732 841 ntBASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28aQ8CEI3 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms