Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gm42599-201ENSMUST00000201308 469 ntBASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.26□□□□□ -0.29
Vcpip1Q8CDG3 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Gm23931-201ENSMUST00000103842 109 ntBASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Gm18584-201ENSMUST00000203098 964 ntBASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Gm18054-201ENSMUST00000207539 555 ntBASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Gm45880-201ENSMUST00000213041 853 ntBASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Snora73a-201ENSMUST00000082453 205 ntBASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.25□□□□□ -0.29
Vcpip1Q8CDG3 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Gm11591-201ENSMUST00000120063 702 ntBASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Gm45930-201ENSMUST00000221330 292 ntBASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcpip1Q8CDG3 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms