Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynbQ8BI41 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
SynbQ8BI41 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynbQ8BI41 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.83□□□□□ -0.52
SynbQ8BI41 Gm12566-201ENSMUST00000121479 359 ntBASIC11.83□□□□□ -0.52
SynbQ8BI41 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynbQ8BI41 Gm26361-201ENSMUST00000158868 186 ntBASIC11.83□□□□□ -0.52
SynbQ8BI41 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
SynbQ8BI41 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.83□□□□□ -0.52
SynbQ8BI41 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.83□□□□□ -0.52
SynbQ8BI41 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SynbQ8BI41 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.83□□□□□ -0.52
SynbQ8BI41 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynbQ8BI41 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynbQ8BI41 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
SynbQ8BI41 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynbQ8BI41 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynbQ8BI41 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.83□□□□□ -0.52
SynbQ8BI41 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SynbQ8BI41 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynbQ8BI41 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynbQ8BI41 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SynbQ8BI41 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SynbQ8BI41 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynbQ8BI41 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynbQ8BI41 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynbQ8BI41 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SynbQ8BI41 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SynbQ8BI41 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynbQ8BI41 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynbQ8BI41 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynbQ8BI41 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
SynbQ8BI41 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynbQ8BI41 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.83□□□□□ -0.52
SynbQ8BI41 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
SynbQ8BI41 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.83□□□□□ -0.52
SynbQ8BI41 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SynbQ8BI41 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SynbQ8BI41 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
SynbQ8BI41 Gm12217-201ENSMUST00000118858 696 ntBASIC11.82□□□□□ -0.52
SynbQ8BI41 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.82□□□□□ -0.52
SynbQ8BI41 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.82□□□□□ -0.52
SynbQ8BI41 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SynbQ8BI41 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.82□□□□□ -0.52
SynbQ8BI41 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
SynbQ8BI41 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
SynbQ8BI41 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.82□□□□□ -0.52
SynbQ8BI41 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.82□□□□□ -0.52
SynbQ8BI41 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.82□□□□□ -0.52
SynbQ8BI41 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SynbQ8BI41 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SynbQ8BI41 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SynbQ8BI41 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SynbQ8BI41 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SynbQ8BI41 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
SynbQ8BI41 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
SynbQ8BI41 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
SynbQ8BI41 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SynbQ8BI41 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.81□□□□□ -0.52
SynbQ8BI41 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
SynbQ8BI41 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.81□□□□□ -0.52
SynbQ8BI41 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.81□□□□□ -0.52
SynbQ8BI41 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SynbQ8BI41 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SynbQ8BI41 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
SynbQ8BI41 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
SynbQ8BI41 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SynbQ8BI41 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
SynbQ8BI41 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.81□□□□□ -0.52
SynbQ8BI41 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SynbQ8BI41 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms