Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Prpf38bQ80SY5 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13□□□□□ -0.33
Prpf38bQ80SY5 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Gm13888-201ENSMUST00000119148 422 ntBASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Prpf38bQ80SY5 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Gm11675-201ENSMUST00000121873 832 ntBASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Gm23699-201ENSMUST00000158835 135 ntBASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Prpf38bQ80SY5 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.97□□□□□ -0.33
Prpf38bQ80SY5 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms