Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm43138-201ENSMUST00000199123 708 ntBASIC12.2□□□□□ -0.46
Pcdh8Q7TSK3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh8Q7TSK3 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdh8Q7TSK3 Gm39404-201ENSMUST00000216350 313 ntBASIC12.2□□□□□ -0.46
Pcdh8Q7TSK3 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh8Q7TSK3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pcdh8Q7TSK3 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pcdh8Q7TSK3 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh8Q7TSK3 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh8Q7TSK3 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh8Q7TSK3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh8Q7TSK3 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh8Q7TSK3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh8Q7TSK3 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh8Q7TSK3 Pck2-205ENSMUST00000226352 2784 ntBASIC12.2□□□□□ -0.46
Pcdh8Q7TSK3 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh8Q7TSK3 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh8Q7TSK3 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdh8Q7TSK3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh8Q7TSK3 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh8Q7TSK3 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdh8Q7TSK3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh8Q7TSK3 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh8Q7TSK3 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.2□□□□□ -0.46
Pcdh8Q7TSK3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Gm14832-201ENSMUST00000121289 322 ntBASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Gm24845-201ENSMUST00000158034 109 ntBASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Gm5070-201ENSMUST00000177599 862 ntBASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.19□□□□□ -0.46
Pcdh8Q7TSK3 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Rprl1-202ENSMUST00000198476 238 ntBASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdh8Q7TSK3 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms