Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Gm12217-201ENSMUST00000118858 696 ntBASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Mir5132-201ENSMUST00000175166 71 ntBASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Mir6927-201ENSMUST00000184494 71 ntBASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Gm28450-201ENSMUST00000187349 638 ntBASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ubfd1Q78JW9 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Ubfd1Q78JW9 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ubfd1Q78JW9 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ubfd1Q78JW9 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ubfd1Q78JW9 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ubfd1Q78JW9 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ubfd1Q78JW9 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ubfd1Q78JW9 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ubfd1Q78JW9 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ubfd1Q78JW9 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ubfd1Q78JW9 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 Gm12266-201ENSMUST00000120311 962 ntBASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 Gm37666-201ENSMUST00000194110 866 ntBASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ubfd1Q78JW9 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubfd1Q78JW9 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.01□□□□□ -0.49
Ubfd1Q78JW9 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubfd1Q78JW9 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ubfd1Q78JW9 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ubfd1Q78JW9 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.01□□□□□ -0.49
Ubfd1Q78JW9 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ubfd1Q78JW9 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubfd1Q78JW9 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Ubfd1Q78JW9 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Ubfd1Q78JW9 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ubfd1Q78JW9 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubfd1Q78JW9 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ubfd1Q78JW9 Gm23912-201ENSMUST00000104687 87 ntBASIC12.01□□□□□ -0.49
Ubfd1Q78JW9 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ubfd1Q78JW9 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ubfd1Q78JW9 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ubfd1Q78JW9 Gm5616-201ENSMUST00000165252 384 ntBASIC12.01□□□□□ -0.49
Ubfd1Q78JW9 Gm8741-201ENSMUST00000174736 384 ntBASIC12.01□□□□□ -0.49
Ubfd1Q78JW9 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.01□□□□□ -0.49
Ubfd1Q78JW9 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.01□□□□□ -0.49
Ubfd1Q78JW9 Gm18711-201ENSMUST00000199341 750 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms