Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nudcd1Q6PIP5 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Nudcd1Q6PIP5 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Nudcd1Q6PIP5 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nudcd1Q6PIP5 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Nudcd1Q6PIP5 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nudcd1Q6PIP5 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nudcd1Q6PIP5 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 Gm23119-201ENSMUST00000158610 140 ntBASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 Gm42937-201ENSMUST00000197360 752 ntBASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Nudcd1Q6PIP5 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Nudcd1Q6PIP5 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.46□□□□□ -0.42
Nudcd1Q6PIP5 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nudcd1Q6PIP5 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Nudcd1Q6PIP5 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Nudcd1Q6PIP5 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Nudcd1Q6PIP5 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nudcd1Q6PIP5 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nudcd1Q6PIP5 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Nudcd1Q6PIP5 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Nudcd1Q6PIP5 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.46□□□□□ -0.42
Nudcd1Q6PIP5 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Gm27341-201ENSMUST00000183570 106 ntBASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Gm44262-201ENSMUST00000204969 372 ntBASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Gm8913-201ENSMUST00000209491 641 ntBASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nudcd1Q6PIP5 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd1Q6PIP5 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd1Q6PIP5 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd1Q6PIP5 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd1Q6PIP5 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd1Q6PIP5 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd1Q6PIP5 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Nudcd1Q6PIP5 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd1Q6PIP5 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd1Q6PIP5 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd1Q6PIP5 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd1Q6PIP5 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd1Q6PIP5 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd1Q6PIP5 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd1Q6PIP5 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd1Q6PIP5 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms