Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scaf4Q6PFF0 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Scaf4Q6PFF0 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Scaf4Q6PFF0 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Gm2423-201ENSMUST00000074863 733 ntBASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scaf4Q6PFF0 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Gm18304-201ENSMUST00000189162 546 ntBASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scaf4Q6PFF0 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scaf4Q6PFF0 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms