Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.1□□□□□ -0.31
Scube3Q66PY1 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scube3Q66PY1 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scube3Q66PY1 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.1□□□□□ -0.31
Scube3Q66PY1 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scube3Q66PY1 Gm28439-201ENSMUST00000187714 876 ntBASIC13.1□□□□□ -0.31
Scube3Q66PY1 Gm31256-201ENSMUST00000194705 506 ntBASIC13.1□□□□□ -0.31
Scube3Q66PY1 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.1□□□□□ -0.31
Scube3Q66PY1 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scube3Q66PY1 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Scube3Q66PY1 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Scube3Q66PY1 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scube3Q66PY1 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scube3Q66PY1 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Scube3Q66PY1 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scube3Q66PY1 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scube3Q66PY1 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scube3Q66PY1 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Scube3Q66PY1 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scube3Q66PY1 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scube3Q66PY1 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scube3Q66PY1 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scube3Q66PY1 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scube3Q66PY1 Gm44286-201ENSMUST00000204098 1487 ntBASIC13.1□□□□□ -0.31
Scube3Q66PY1 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scube3Q66PY1 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scube3Q66PY1 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Scube3Q66PY1 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scube3Q66PY1 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Gm13059-201ENSMUST00000119881 398 ntBASIC13.09□□□□□ -0.31
Scube3Q66PY1 Gm12372-201ENSMUST00000121654 768 ntBASIC13.09□□□□□ -0.31
Scube3Q66PY1 Gm14381-201ENSMUST00000122105 414 ntBASIC13.09□□□□□ -0.31
Scube3Q66PY1 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.09□□□□□ -0.31
Scube3Q66PY1 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scube3Q66PY1 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Gm28882-201ENSMUST00000185504 314 ntBASIC13.09□□□□□ -0.31
Scube3Q66PY1 Gm4857-201ENSMUST00000192718 785 ntBASIC13.09□□□□□ -0.31
Scube3Q66PY1 Gm37259-201ENSMUST00000193903 849 ntBASIC13.09□□□□□ -0.31
Scube3Q66PY1 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.09□□□□□ -0.31
Scube3Q66PY1 Gm42937-201ENSMUST00000197360 752 ntBASIC13.09□□□□□ -0.31
Scube3Q66PY1 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scube3Q66PY1 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.09□□□□□ -0.31
Scube3Q66PY1 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.09□□□□□ -0.31
Scube3Q66PY1 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Scube3Q66PY1 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Scube3Q66PY1 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Scube3Q66PY1 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.08□□□□□ -0.31
Scube3Q66PY1 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.31
Scube3Q66PY1 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Scube3Q66PY1 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scube3Q66PY1 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scube3Q66PY1 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scube3Q66PY1 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Scube3Q66PY1 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scube3Q66PY1 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scube3Q66PY1 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Scube3Q66PY1 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scube3Q66PY1 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
Scube3Q66PY1 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Scube3Q66PY1 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scube3Q66PY1 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Scube3Q66PY1 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.08□□□□□ -0.32
Scube3Q66PY1 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Scube3Q66PY1 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC13.08□□□□□ -0.32
Scube3Q66PY1 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.08□□□□□ -0.32
Scube3Q66PY1 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Scube3Q66PY1 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scube3Q66PY1 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scube3Q66PY1 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scube3Q66PY1 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms