Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a4Q60857 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Slc6a4Q60857 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.62□□□□□ -0.39
Slc6a4Q60857 Rprl1-201ENSMUST00000158050 327 ntBASIC12.62□□□□□ -0.39
Slc6a4Q60857 Mir6927-201ENSMUST00000184494 71 ntBASIC12.62□□□□□ -0.39
Slc6a4Q60857 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a4Q60857 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a4Q60857 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.62□□□□□ -0.39
Slc6a4Q60857 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a4Q60857 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a4Q60857 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Slc6a4Q60857 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Slc6a4Q60857 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a4Q60857 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a4Q60857 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a4Q60857 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a4Q60857 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Slc6a4Q60857 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a4Q60857 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a4Q60857 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.61□□□□□ -0.39
Slc6a4Q60857 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Gm4909-201ENSMUST00000118749 794 ntBASIC12.61□□□□□ -0.39
Slc6a4Q60857 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Gm5616-201ENSMUST00000165252 384 ntBASIC12.61□□□□□ -0.39
Slc6a4Q60857 Gm8741-201ENSMUST00000174736 384 ntBASIC12.61□□□□□ -0.39
Slc6a4Q60857 Gm25732-201ENSMUST00000175168 60 ntBASIC12.61□□□□□ -0.39
Slc6a4Q60857 Mir3102-201ENSMUST00000175555 104 ntBASIC12.61□□□□□ -0.39
Slc6a4Q60857 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Gm9630-201ENSMUST00000178304 885 ntBASIC12.61□□□□□ -0.39
Slc6a4Q60857 Gm29615-201ENSMUST00000185371 697 ntBASIC12.61□□□□□ -0.39
Slc6a4Q60857 Gm28224-201ENSMUST00000186078 697 ntBASIC12.61□□□□□ -0.39
Slc6a4Q60857 Gm29001-201ENSMUST00000186177 697 ntBASIC12.61□□□□□ -0.39
Slc6a4Q60857 Gm28292-201ENSMUST00000186593 697 ntBASIC12.61□□□□□ -0.39
Slc6a4Q60857 Gm28101-201ENSMUST00000187608 697 ntBASIC12.61□□□□□ -0.39
Slc6a4Q60857 Gm29076-201ENSMUST00000187689 697 ntBASIC12.61□□□□□ -0.39
Slc6a4Q60857 Gm28302-201ENSMUST00000187931 697 ntBASIC12.61□□□□□ -0.39
Slc6a4Q60857 Gm28646-201ENSMUST00000188220 697 ntBASIC12.61□□□□□ -0.39
Slc6a4Q60857 Gm28205-201ENSMUST00000189177 697 ntBASIC12.61□□□□□ -0.39
Slc6a4Q60857 Gm29032-201ENSMUST00000189797 697 ntBASIC12.61□□□□□ -0.39
Slc6a4Q60857 Gm28695-201ENSMUST00000190300 697 ntBASIC12.61□□□□□ -0.39
Slc6a4Q60857 Gm37448-201ENSMUST00000192795 697 ntBASIC12.61□□□□□ -0.39
Slc6a4Q60857 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.61□□□□□ -0.39
Slc6a4Q60857 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a4Q60857 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a4Q60857 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a4Q60857 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a4Q60857 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a4Q60857 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.6□□□□□ -0.39
Slc6a4Q60857 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a4Q60857 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Slc6a4Q60857 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a4Q60857 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Slc6a4Q60857 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a4Q60857 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a4Q60857 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a4Q60857 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a4Q60857 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Slc6a4Q60857 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a4Q60857 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.6□□□□□ -0.39
Slc6a4Q60857 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.6□□□□□ -0.39
Slc6a4Q60857 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a4Q60857 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a4Q60857 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a4Q60857 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a4Q60857 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Slc6a4Q60857 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Slc6a4Q60857 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms