Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim41Q5NCC3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC21.43■■□□□ 1.02
Trim41Q5NCC3 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trim41Q5NCC3 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Trim41Q5NCC3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Trim41Q5NCC3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Trim41Q5NCC3 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC21.42■■□□□ 1.02
Trim41Q5NCC3 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim41Q5NCC3 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trim41Q5NCC3 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trim41Q5NCC3 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Trim41Q5NCC3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim41Q5NCC3 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC21.42■■□□□ 1.02
Trim41Q5NCC3 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim41Q5NCC3 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC21.42■■□□□ 1.02
Trim41Q5NCC3 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trim41Q5NCC3 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC21.42■■□□□ 1.02
Trim41Q5NCC3 Gm35960-201ENSMUST00000202712 767 ntBASIC21.42■■□□□ 1.02
Trim41Q5NCC3 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC21.42■■□□□ 1.02
Trim41Q5NCC3 Gm14005-208ENSMUST00000223654 681 ntBASIC21.42■■□□□ 1.02
Trim41Q5NCC3 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC21.42■■□□□ 1.02
Trim41Q5NCC3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim41Q5NCC3 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim41Q5NCC3 Gm5455-201ENSMUST00000058710 715 ntBASIC21.42■■□□□ 1.02
Trim41Q5NCC3 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Trim41Q5NCC3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Trim41Q5NCC3 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim41Q5NCC3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Gm22138-201ENSMUST00000158748 128 ntBASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 AC134537.1-201ENSMUST00000219205 265 ntBASIC21.41■■□□□ 1.02
Trim41Q5NCC3 AC166341.2-201ENSMUST00000220571 120 ntBASIC21.41■■□□□ 1.02
Trim41Q5NCC3 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Mirlet7i-201ENSMUST00000083472 85 ntBASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Zkscan3-207ENSMUST00000223831 2101 ntBASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim41Q5NCC3 Gm42928-201ENSMUST00000197338 3339 ntBASIC21.4■■□□□ 1.02
Trim41Q5NCC3 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC21.4■■□□□ 1.02
Trim41Q5NCC3 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Trim41Q5NCC3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Trim41Q5NCC3 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC21.4■■□□□ 1.02
Trim41Q5NCC3 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim41Q5NCC3 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Trim41Q5NCC3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC21.4■■□□□ 1.02
Trim41Q5NCC3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
Trim41Q5NCC3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim41Q5NCC3 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Trim41Q5NCC3 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC21.4■■□□□ 1.02
Trim41Q5NCC3 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trim41Q5NCC3 Gm13549-201ENSMUST00000118339 796 ntBASIC21.4■■□□□ 1.02
Trim41Q5NCC3 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trim41Q5NCC3 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim41Q5NCC3 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim41Q5NCC3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trim41Q5NCC3 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Trim41Q5NCC3 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim41Q5NCC3 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim41Q5NCC3 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Trim41Q5NCC3 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trim41Q5NCC3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim41Q5NCC3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Trim41Q5NCC3 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Trim41Q5NCC3 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC21.4■■□□□ 1.02
Trim41Q5NCC3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trim41Q5NCC3 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trim41Q5NCC3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Trim41Q5NCC3 Gm14150-201ENSMUST00000122404 1354 ntBASIC21.39■■□□□ 1.02
Trim41Q5NCC3 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim41Q5NCC3 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim41Q5NCC3 Mir744-201ENSMUST00000103261 100 ntBASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms