Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.19□□□□□ -0.46
Scn2bQ56A07 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Gm42599-201ENSMUST00000201308 469 ntBASIC12.19□□□□□ -0.46
Scn2bQ56A07 Gm35960-201ENSMUST00000202712 767 ntBASIC12.19□□□□□ -0.46
Scn2bQ56A07 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.19□□□□□ -0.46
Scn2bQ56A07 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Scn2bQ56A07 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.19□□□□□ -0.46
Scn2bQ56A07 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.19□□□□□ -0.46
Scn2bQ56A07 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scn2bQ56A07 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.18□□□□□ -0.46
Scn2bQ56A07 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Scn2bQ56A07 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Gm11597-201ENSMUST00000121423 964 ntBASIC12.18□□□□□ -0.46
Scn2bQ56A07 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Gm17420-201ENSMUST00000164753 153 ntBASIC12.18□□□□□ -0.46
Scn2bQ56A07 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.18□□□□□ -0.46
Scn2bQ56A07 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.18□□□□□ -0.46
Scn2bQ56A07 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.18□□□□□ -0.46
Scn2bQ56A07 Gm24136-201ENSMUST00000083374 165 ntBASIC12.18□□□□□ -0.46
Scn2bQ56A07 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scn2bQ56A07 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn2bQ56A07 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms