Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Gm12217-201ENSMUST00000118858 696 ntBASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Gm13570-201ENSMUST00000140763 309 ntBASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Gm24239-201ENSMUST00000157791 255 ntBASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Gm5717-201ENSMUST00000198243 1062 ntBASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tmem40Q4FJU9 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Gm38359-201ENSMUST00000191884 2225 ntBASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Gm38014-201ENSMUST00000193349 2612 ntBASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Gm25214-201ENSMUST00000104573 129 ntBASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Gm13255-201ENSMUST00000117255 547 ntBASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Gm11930-201ENSMUST00000117788 190 ntBASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Gm14938-201ENSMUST00000119482 943 ntBASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Cgrrf1-203ENSMUST00000133989 873 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Gm27046-201ENSMUST00000182160 463 ntBASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 AA914427-201ENSMUST00000193194 1166 ntBASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Gm42516-201ENSMUST00000198691 767 ntBASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Gm5950-201ENSMUST00000213337 772 ntBASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 AC137950.3-201ENSMUST00000228250 246 ntBASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Gm43670-201ENSMUST00000199047 1767 ntBASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tmem40Q4FJU9 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 175.1 ms