Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Mir1982-201ENSMUST00000157368 74 ntBASIC14.02□□□□□ -0.17
Gm28047Q3US59 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.02□□□□□ -0.17
Gm28047Q3US59 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.02□□□□□ -0.17
Gm28047Q3US59 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.02□□□□□ -0.17
Gm28047Q3US59 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.02□□□□□ -0.17
Gm28047Q3US59 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Gm28047Q3US59 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.02□□□□□ -0.17
Gm28047Q3US59 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28047Q3US59 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28047Q3US59 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28047Q3US59 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Gm28047Q3US59 Gm9396-201ENSMUST00000076703 567 ntBASIC14.02□□□□□ -0.17
Gm28047Q3US59 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28047Q3US59 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28047Q3US59 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28047Q3US59 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28047Q3US59 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28047Q3US59 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Gm28047Q3US59 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28047Q3US59 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28047Q3US59 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Gm28047Q3US59 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28047Q3US59 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28047Q3US59 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28047Q3US59 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28047Q3US59 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Gm28047Q3US59 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28047Q3US59 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.01□□□□□ -0.17
Gm28047Q3US59 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Gm43727-201ENSMUST00000198021 2647 ntBASIC14.01□□□□□ -0.17
Gm28047Q3US59 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Gm28047Q3US59 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28047Q3US59 CT573086.2-201ENSMUST00000227277 4992 ntBASIC14.01□□□□□ -0.17
Gm28047Q3US59 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.01□□□□□ -0.17
Gm28047Q3US59 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28047Q3US59 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.01□□□□□ -0.17
Gm28047Q3US59 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.01□□□□□ -0.17
Gm28047Q3US59 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28047Q3US59 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28047Q3US59 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28047Q3US59 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28047Q3US59 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28047Q3US59 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28047Q3US59 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14□□□□□ -0.17
Gm28047Q3US59 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28047Q3US59 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28047Q3US59 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14□□□□□ -0.17
Gm28047Q3US59 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14□□□□□ -0.17
Gm28047Q3US59 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14□□□□□ -0.17
Gm28047Q3US59 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Gm28047Q3US59 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28047Q3US59 Gm5370-201ENSMUST00000187187 574 ntBASIC14□□□□□ -0.17
Gm28047Q3US59 Gm18187-201ENSMUST00000196476 984 ntBASIC14□□□□□ -0.17
Gm28047Q3US59 Dhrs4-202ENSMUST00000226168 828 ntBASIC14□□□□□ -0.17
Gm28047Q3US59 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28047Q3US59 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28047Q3US59 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28047Q3US59 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28047Q3US59 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gm28047Q3US59 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28047Q3US59 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Gm28047Q3US59 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14□□□□□ -0.17
Gm28047Q3US59 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28047Q3US59 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Gm28047Q3US59 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28047Q3US59 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Gm28047Q3US59 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28047Q3US59 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm28047Q3US59 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gm28047Q3US59 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm28047Q3US59 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.99□□□□□ -0.17
Gm28047Q3US59 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.99□□□□□ -0.17
Gm28047Q3US59 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm28047Q3US59 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms