Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Gm17213-201ENSMUST00000165161 1360 ntBASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Gm6170-201ENSMUST00000187672 1388 ntBASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vars2Q3U2A8 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Gm10728-201ENSMUST00000194292 1829 ntBASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Gm43807-201ENSMUST00000200678 1781 ntBASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Gm11619-201ENSMUST00000117474 237 ntBASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Gm15615-201ENSMUST00000118876 198 ntBASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Gm9089-201ENSMUST00000122027 526 ntBASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Gm37852-201ENSMUST00000193027 350 ntBASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Gm38151-201ENSMUST00000195085 289 ntBASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Gm7082-201ENSMUST00000209880 969 ntBASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Gm5513-201ENSMUST00000072982 1218 ntBASIC15.17■□□□□ 0.02
Vars2Q3U2A8 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Vars2Q3U2A8 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Gm5555-201ENSMUST00000120352 1111 ntBASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Gm26368-201ENSMUST00000157826 118 ntBASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Gm28833-201ENSMUST00000189671 559 ntBASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Gm45592-201ENSMUST00000209605 1043 ntBASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vars2Q3U2A8 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms