Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pdlim7Q3TJD7 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Pdlim7Q3TJD7 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pdlim7Q3TJD7 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Pdlim7Q3TJD7 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Pdlim7Q3TJD7 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pdlim7Q3TJD7 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.77□□□□□ -0.2
Pdlim7Q3TJD7 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pdlim7Q3TJD7 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pdlim7Q3TJD7 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Gm11663-201ENSMUST00000117888 290 ntBASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Gm15725-201ENSMUST00000119947 1090 ntBASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Gm9645-201ENSMUST00000197131 792 ntBASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Gm43186-201ENSMUST00000198130 824 ntBASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Gm9797-202ENSMUST00000218003 294 ntBASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Pdlim7Q3TJD7 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 Gm45575-201ENSMUST00000210283 548 ntBASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pdlim7Q3TJD7 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim7Q3TJD7 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim7Q3TJD7 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim7Q3TJD7 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim7Q3TJD7 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim7Q3TJD7 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.75□□□□□ -0.21
Pdlim7Q3TJD7 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim7Q3TJD7 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim7Q3TJD7 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim7Q3TJD7 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pdlim7Q3TJD7 Gm11511-201ENSMUST00000118146 540 ntBASIC13.75□□□□□ -0.21
Pdlim7Q3TJD7 Gm12969-201ENSMUST00000120199 1004 ntBASIC13.75□□□□□ -0.21
Pdlim7Q3TJD7 Gm15566-201ENSMUST00000121130 590 ntBASIC13.75□□□□□ -0.21
Pdlim7Q3TJD7 Gm13263-201ENSMUST00000121271 838 ntBASIC13.75□□□□□ -0.21
Pdlim7Q3TJD7 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim7Q3TJD7 Rprl1-201ENSMUST00000158050 327 ntBASIC13.75□□□□□ -0.21
Pdlim7Q3TJD7 Gm18159-201ENSMUST00000174516 1070 ntBASIC13.75□□□□□ -0.21
Pdlim7Q3TJD7 Gm23045-201ENSMUST00000175041 96 ntBASIC13.75□□□□□ -0.21
Pdlim7Q3TJD7 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim7Q3TJD7 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim7Q3TJD7 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim7Q3TJD7 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim7Q3TJD7 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim7Q3TJD7 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pdlim7Q3TJD7 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms