Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.1□□□□□ -0.47
Q3KNL4 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3KNL4 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3KNL4 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.1□□□□□ -0.47
Q3KNL4 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3KNL4 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Q3KNL4 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.1□□□□□ -0.47
Q3KNL4 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.1□□□□□ -0.47
Q3KNL4 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.1□□□□□ -0.47
Q3KNL4 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Q3KNL4 Gm27390-201ENSMUST00000184516 176 ntBASIC12.1□□□□□ -0.47
Q3KNL4 Gm5904-201ENSMUST00000210286 865 ntBASIC12.1□□□□□ -0.47
Q3KNL4 Gm7561-201ENSMUST00000211203 886 ntBASIC12.1□□□□□ -0.47
Q3KNL4 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Q3KNL4 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.1□□□□□ -0.47
Q3KNL4 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Q3KNL4 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3KNL4 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3KNL4 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3KNL4 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Q3KNL4 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Q3KNL4 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Q3KNL4 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3KNL4 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Q3KNL4 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3KNL4 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3KNL4 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Q3KNL4 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3KNL4 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Q3KNL4 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Q3KNL4 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.09□□□□□ -0.47
Q3KNL4 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3KNL4 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Q3KNL4 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3KNL4 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3KNL4 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3KNL4 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.09□□□□□ -0.47
Q3KNL4 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3KNL4 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Q3KNL4 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3KNL4 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3KNL4 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Q3KNL4 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3KNL4 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.09□□□□□ -0.47
Q3KNL4 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.09□□□□□ -0.47
Q3KNL4 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Q3KNL4 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Q3KNL4 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.09□□□□□ -0.47
Q3KNL4 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.09□□□□□ -0.47
Q3KNL4 Gm6007-201ENSMUST00000208170 823 ntBASIC12.09□□□□□ -0.47
Q3KNL4 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.09□□□□□ -0.47
Q3KNL4 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.09□□□□□ -0.47
Q3KNL4 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Q3KNL4 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Q3KNL4 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.09□□□□□ -0.47
Q3KNL4 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.09□□□□□ -0.47
Q3KNL4 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3KNL4 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Q3KNL4 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3KNL4 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Q3KNL4 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3KNL4 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3KNL4 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3KNL4 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Q3KNL4 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3KNL4 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3KNL4 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3KNL4 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3KNL4 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.09□□□□□ -0.47
Q3KNL4 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3KNL4 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3KNL4 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Q3KNL4 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3KNL4 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.09□□□□□ -0.47
Q3KNL4 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Q3KNL4 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Q3KNL4 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.47
Q3KNL4 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Q3KNL4 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Q3KNL4 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Q3KNL4 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Q3KNL4 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Q3KNL4 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Q3KNL4 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Q3KNL4 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Q3KNL4 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Q3KNL4 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.08□□□□□ -0.48
Q3KNL4 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Q3KNL4 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Q3KNL4 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Q3KNL4 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Q3KNL4 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Q3KNL4 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Q3KNL4 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.08□□□□□ -0.48
Q3KNL4 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.08□□□□□ -0.48
Q3KNL4 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.08□□□□□ -0.48
Q3KNL4 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.08□□□□□ -0.48
Q3KNL4 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Q3KNL4 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.08□□□□□ -0.48
Q3KNL4 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms