Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43cP86449 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Trim43cP86449 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43cP86449 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43cP86449 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.41□□□□□ -0.26
Trim43cP86449 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim43cP86449 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim43cP86449 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trim43cP86449 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trim43cP86449 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim43cP86449 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Trim43cP86449 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.4□□□□□ -0.26
Trim43cP86449 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trim43cP86449 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Trim43cP86449 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 Gm23270-201ENSMUST00000104055 131 ntBASIC13.4□□□□□ -0.26
Trim43cP86449 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.4□□□□□ -0.26
Trim43cP86449 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.4□□□□□ -0.26
Trim43cP86449 Gm14726-201ENSMUST00000120623 896 ntBASIC13.4□□□□□ -0.26
Trim43cP86449 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim43cP86449 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trim43cP86449 Gm2991-201ENSMUST00000173338 480 ntBASIC13.4□□□□□ -0.26
Trim43cP86449 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 Gm4034-201ENSMUST00000187674 480 ntBASIC13.4□□□□□ -0.26
Trim43cP86449 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.4□□□□□ -0.26
Trim43cP86449 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim43cP86449 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim43cP86449 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.4□□□□□ -0.26
Trim43cP86449 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trim43cP86449 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trim43cP86449 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC13.4□□□□□ -0.26
Trim43cP86449 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Trim43cP86449 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43cP86449 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trim43cP86449 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim43cP86449 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Trim43cP86449 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trim43cP86449 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trim43cP86449 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trim43cP86449 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trim43cP86449 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trim43cP86449 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trim43cP86449 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 Gm14644-201ENSMUST00000116671 647 ntBASIC13.39□□□□□ -0.27
Trim43cP86449 Gm15198-201ENSMUST00000117283 177 ntBASIC13.39□□□□□ -0.27
Trim43cP86449 Gm12241-201ENSMUST00000118330 726 ntBASIC13.39□□□□□ -0.27
Trim43cP86449 Gm14247-201ENSMUST00000120950 237 ntBASIC13.39□□□□□ -0.27
Trim43cP86449 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.39□□□□□ -0.27
Trim43cP86449 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Trim43cP86449 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
Trim43cP86449 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.39□□□□□ -0.27
Trim43cP86449 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim43cP86449 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim43cP86449 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.39□□□□□ -0.27
Trim43cP86449 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim43cP86449 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43cP86449 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim43cP86449 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.39□□□□□ -0.27
Trim43cP86449 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms