Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.3□□□□□ -0.76
Pdlim4P70271 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.3□□□□□ -0.76
Pdlim4P70271 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Pdlim4P70271 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Pdlim4P70271 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.3□□□□□ -0.76
Pdlim4P70271 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.3□□□□□ -0.76
Pdlim4P70271 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.3□□□□□ -0.76
Pdlim4P70271 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Pdlim4P70271 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.3□□□□□ -0.76
Pdlim4P70271 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Map1b-203ENSMUST00000223725 2669 ntBASIC10.3□□□□□ -0.76
Pdlim4P70271 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Pdlim4P70271 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
Pdlim4P70271 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Pdlim4P70271 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.29□□□□□ -0.76
Pdlim4P70271 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.29□□□□□ -0.76
Pdlim4P70271 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.29□□□□□ -0.76
Pdlim4P70271 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Pdlim4P70271 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Pdlim4P70271 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.29□□□□□ -0.76
Pdlim4P70271 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.29□□□□□ -0.76
Pdlim4P70271 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.29□□□□□ -0.76
Pdlim4P70271 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.29□□□□□ -0.76
Pdlim4P70271 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.29□□□□□ -0.76
Pdlim4P70271 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.29□□□□□ -0.76
Pdlim4P70271 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.29□□□□□ -0.76
Pdlim4P70271 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
Pdlim4P70271 Gm8018-201ENSMUST00000173536 789 ntBASIC10.29□□□□□ -0.76
Pdlim4P70271 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
Pdlim4P70271 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.29□□□□□ -0.76
Pdlim4P70271 Olfr284-202ENSMUST00000206647 966 ntBASIC10.29□□□□□ -0.76
Pdlim4P70271 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.29□□□□□ -0.76
Pdlim4P70271 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.29□□□□□ -0.76
Pdlim4P70271 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Pdlim4P70271 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Pdlim4P70271 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Pdlim4P70271 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.29□□□□□ -0.76
Pdlim4P70271 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.29□□□□□ -0.76
Pdlim4P70271 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.29□□□□□ -0.76
Pdlim4P70271 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pdlim4P70271 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Pdlim4P70271 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pdlim4P70271 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pdlim4P70271 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pdlim4P70271 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pdlim4P70271 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pdlim4P70271 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pdlim4P70271 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pdlim4P70271 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms