Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.12□□□□□ -0.47
Lhx1P63006 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Lhx1P63006 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx1P63006 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx1P63006 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx1P63006 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx1P63006 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.12□□□□□ -0.47
Lhx1P63006 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.12□□□□□ -0.47
Lhx1P63006 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx1P63006 Gm44262-201ENSMUST00000204969 372 ntBASIC12.12□□□□□ -0.47
Lhx1P63006 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.12□□□□□ -0.47
Lhx1P63006 Gm5363-201ENSMUST00000211927 938 ntBASIC12.12□□□□□ -0.47
Lhx1P63006 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.12□□□□□ -0.47
Lhx1P63006 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx1P63006 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx1P63006 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.12□□□□□ -0.47
Lhx1P63006 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.12□□□□□ -0.47
Lhx1P63006 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx1P63006 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx1P63006 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx1P63006 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx1P63006 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx1P63006 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx1P63006 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx1P63006 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx1P63006 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx1P63006 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx1P63006 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.11□□□□□ -0.47
Lhx1P63006 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Lhx1P63006 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Lhx1P63006 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.11□□□□□ -0.47
Lhx1P63006 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Lhx1P63006 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Lhx1P63006 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Gm12997-201ENSMUST00000120207 640 ntBASIC12.11□□□□□ -0.47
Lhx1P63006 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.11□□□□□ -0.47
Lhx1P63006 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Lhx1P63006 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.11□□□□□ -0.47
Lhx1P63006 Gm2260-201ENSMUST00000184965 657 ntBASIC12.11□□□□□ -0.47
Lhx1P63006 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Gm17812-201ENSMUST00000204935 318 ntBASIC12.11□□□□□ -0.47
Lhx1P63006 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.11□□□□□ -0.47
Lhx1P63006 Gm45433-201ENSMUST00000209386 247 ntBASIC12.11□□□□□ -0.47
Lhx1P63006 Gm8913-201ENSMUST00000209491 641 ntBASIC12.11□□□□□ -0.47
Lhx1P63006 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.11□□□□□ -0.47
Lhx1P63006 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.11□□□□□ -0.47
Lhx1P63006 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Lhx1P63006 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Lhx1P63006 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.11□□□□□ -0.47
Lhx1P63006 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lhx1P63006 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx1P63006 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx1P63006 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lhx1P63006 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx1P63006 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Lhx1P63006 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx1P63006 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.1□□□□□ -0.47
Lhx1P63006 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx1P63006 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx1P63006 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx1P63006 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.1□□□□□ -0.47
Lhx1P63006 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx1P63006 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.1□□□□□ -0.47
Lhx1P63006 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Lhx1P63006 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.1□□□□□ -0.47
Lhx1P63006 Gm45224-201ENSMUST00000208203 414 ntBASIC12.1□□□□□ -0.47
Lhx1P63006 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.1□□□□□ -0.47
Lhx1P63006 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.1□□□□□ -0.47
Lhx1P63006 Gm8385-201ENSMUST00000058999 643 ntBASIC12.1□□□□□ -0.47
Lhx1P63006 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lhx1P63006 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Lhx1P63006 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms