Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC8.77□□□□□ -1.01
Rpl39P62892 Gm42612-201ENSMUST00000197986 623 ntBASIC8.77□□□□□ -1.01
Rpl39P62892 Gm43170-201ENSMUST00000199827 612 ntBASIC8.77□□□□□ -1.01
Rpl39P62892 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 Gm18307-201ENSMUST00000206864 949 ntBASIC8.77□□□□□ -1.01
Rpl39P62892 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1.01
Rpl39P62892 AC124732.1-201ENSMUST00000221551 910 ntBASIC8.77□□□□□ -1.01
Rpl39P62892 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Rpl39P62892 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Rpl39P62892 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Rpl39P62892 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Rpl39P62892 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC8.77□□□□□ -1.01
Rpl39P62892 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Rpl39P62892 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 Ldb3-207ENSMUST00000227819 1499 ntBASIC8.77□□□□□ -1.01
Rpl39P62892 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Rpl39P62892 Gm17230-201ENSMUST00000171194 3942 ntBASIC8.76□□□□□ -1.01
Rpl39P62892 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC8.76□□□□□ -1.01
Rpl39P62892 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Rpl39P62892 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Rpl39P62892 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Rpl39P62892 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Rpl39P62892 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
Rpl39P62892 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Rpl39P62892 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Ldha-ps-201ENSMUST00000119390 995 ntBASIC8.76□□□□□ -1.01
Rpl39P62892 Gm12341-201ENSMUST00000119724 503 ntBASIC8.76□□□□□ -1.01
Rpl39P62892 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
Rpl39P62892 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC8.76□□□□□ -1.01
Rpl39P62892 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC8.76□□□□□ -1.01
Rpl39P62892 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC8.76□□□□□ -1.01
Rpl39P62892 AC165260.3-202ENSMUST00000224550 1031 ntBASIC8.76□□□□□ -1.01
Rpl39P62892 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Gm42913-201ENSMUST00000197936 1853 ntBASIC8.76□□□□□ -1.01
Rpl39P62892 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC8.76□□□□□ -1.01
Rpl39P62892 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC8.76□□□□□ -1.01
Rpl39P62892 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Rpl39P62892 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Rpl39P62892 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Rpl39P62892 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Rpl39P62892 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC8.75□□□□□ -1.01
Rpl39P62892 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Rpl39P62892 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC8.75□□□□□ -1.01
Rpl39P62892 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Rpl39P62892 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Rpl39P62892 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC8.75□□□□□ -1.01
Rpl39P62892 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Rpl39P62892 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Rpl39P62892 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Rpl39P62892 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Rpl39P62892 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Rpl39P62892 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms